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I'm a data and ML scientist with more than 10 years of experience as project and team lead in diverse, international teams both in academia and industry.
- I built and led a team of 7 data and ML scientist at a fast growing scale-up biotech in Oxford, UK.
- I have worked as a data scientist in biomedical research at some of the most renowned universities and research centres around the world, including MIT, Harvard and Max Planck Institutes.
- I have a proven track record of tackling big, hard, problems outside my comfort zone and delivering innovative solutions. My academic work was published in the most prestigious scientist journals, including Nature, Science and Cell.
- I have a strong interest to present my findings in an accessible manner to audiences, be it small teams or conference audiences with hundreds of viewers.
Software: R, Python, SQL
Projekt- und Berufserfahrung
- Ochre BioLead Data ScientistBIOTECHNOLOGIEJanuar 2021 - September 2022 (1 Jahr und 8 Monate)Oxford, Vereinigtes KönigreichOchre Bio is a biotech company using big data genomics to develop RNA therapies for transplant livers.- I built and led a team of seven data and ML scientists across three sites (Oxford, NYC and Taipei)- I was responsible for the full data science stack, from experimental design to data pipelines and database infrastructure in the cloud, from exploratory analyses and ML applications to knowledge interfaces for internal and external stakeholders
- Data Science ConsultantConsultantBERATUNG & AUDITSMai 2020 - Heute (4 Jahre und 11 Monate)
- Centre for Genomic Regulation (CRG)Computational ScientistBIOTECHNOLOGIEMai 2016 - Juni 2020 (4 Jahre und 1 Monat)Barcelona, Spain- developed ML framework and appropriate data-generating experiments to explore hidden control of proteins (Faure, Domingo, Schmiedel et al., Nature 2022)- developed a new, ML-driven approach to predict protein structures from high throughput mutagenesis of proteins (Schmiedel & Lehner, Nature Genetics 2019)- developed statistical models and co-authored an R/bioconda package to process and quantify high-throughput mutagenesis data (Faure & Schmiedel et al., Genome Biology, 2020)
Externe Empfehlungen
Ausbildung und Abschlüsse
- Doctor of Philosophy - PhD, Theoretical BiophysicsHumboldt University of Berlin2015Doctor of Philosophy - PhD, Theoretical Biophysics
- Diplom, BiophysicsHumboldt University of Berlin2008Diplom, Biophysics
- Vor-Diplom, BiophysicsUniversity of Kaiserslautern2005Vor-Diplom, Biophysics